OpenMS
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QualityControl

Generates an mzTab file from various sources of a pipeline (mainly a ConsensusXML) which can be used for QC plots (e.g. via the R package 'PTXQC').

pot. predecessor tools → QualityControl → pot. successor tools
FeatureLinkerUnlabeledKD (or FLs; for consensusXML) PTX-QC
IDMapper (for featureXMLs)
InternalCalibration

See TOPP_example_qualitycontrol for details.

The command line parameters of this tool are:

INI file documentation of this tool: